Citation:
Zhang Y, Sun H, Mandava A, Aevermann BD, Kollmann TR, Scheuermann RH, Qiu X, Qian Y. FastMix: a versatile data integration pipeline for cell type-specific biomarker inference. Bioinformatics. 2022;38(20):4735-44.
Keywords:
Biological marker; transcriptome; cross-sectional study; data analysis; software; Biomarkers; Cross-Sectional Studies
Abstract:
Flow cytometry (FCM) and transcription profiling are the two widely used assays in translational immunology research. However, there is no data integration pipeline for analyzing these two types of assays together with experiment variables for biomarker inference.